Index A | C | D | F | G | K | M | N | P | Q | R | S | T | U A aggregate() (in module scmorph.pp) aggregate_mahalanobis() (in module scmorph.pp) aggregate_pc() (in module scmorph.pp) aggregate_ttest() (in module scmorph.pp) C corr() (in module scmorph.pp) cumulative_density() (in module scmorph.pl) D drop_na() (in module scmorph.pp) F filter_outliers() (in module scmorph.qc) G get_ks() (in module scmorph.tl) K kruskal_filter() (in module scmorph.pp) kruskal_test() (in module scmorph.pp) M make_AnnData() (in module scmorph.io) N neighbors() (in module scmorph.pp) P pca() (in module scmorph.pl) (in module scmorph.pp) Q qc_images() (in module scmorph.qc) R read() (in module scmorph.io) read_cellprofiler_batches() (in module scmorph.io) read_cellprofiler_csv() (in module scmorph.io) read_image_qc() (in module scmorph.qc) read_sql() (in module scmorph.io) remove_batch_effects() (in module scmorph.pp) ridge_plot() (in module scmorph.pl) rohban2017() (in module scmorph.datasets) rohban2017_imageQC() (in module scmorph.datasets) rohban2017_minimal() (in module scmorph.datasets) rohban2017_minimal_csv() (in module scmorph.datasets) S scale() (in module scmorph.pp) scale_by_batch() (in module scmorph.pp) select_features() (in module scmorph.pp) slingshot() (in module scmorph.tl) split_feature_names() (in module scmorph.io) T test_common_trajectory() (in module scmorph.tl) test_differential_differentiation() (in module scmorph.tl) test_differential_progression() (in module scmorph.tl) tstat_distance() (in module scmorph.pp) U umap() (in module scmorph.pl) (in module scmorph.pp)