scmorph.pl.pca

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scmorph.pl.pca#

scmorph.pl.pca(adata, annotate_var_explained=True, **kwargs)#

Principal component analysis [Pedregosa et al., 2011].

This function wraps the higher-level function pca() ([Wolf et al., 2018]).

Parameters:

  • adata (AnnData) – AnnData object

  • annotate_var_explained (bool (default: True)) – Annotate the variance explained by each component in the plot axis labels.

  • kwargs – Additional arguments passed to pca().

Return type:

Axes | list[Axes] | None

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