Datasets: datasets

Datasets: datasets#

Datasets that are included with scmorph for testing and demonstration purposes. Currently, this includes various versions of the data in [Rohban et al., 2017].

rohban2017([backed])

Load a large multi-plate experiment by Rohban et al. [2017] with ~1.2M cells

rohban2017_minimal([backed])

Load a subset of a multi-plate experiment by Rohban et al. [2017] with ~12,000 cells

rohban2017_imageQC([backed])

Load image-level data for a multi-plate experiment by Rohban et al. [2017]

rohban2017_minimal_csv()

Provides a minimal csv file in CellProfiler format, data from Rohban et al. [2017]