Changelog

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Changelog#

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

0.1.0#

This is the initial release of scmorph. It is a beta release, so anticipate further functionalities and possible API changes.

At this initial stage, scmorph focuses on

  • Efficiently processing millions of morphological profiles efficiently

  • Quality controlling single-cells

  • Batch effect correction

  • Dimensionality reduction

  • Advanced aggregation techniques

Stay tuned for further functionalities!

0.2.0#

Release in preparation for JOSS submission.

  • Integrate trajectory inference

  • Switch to scverse-cookiecutter template

This is a minor release that addresses some issues with building documentation and continous integration.

0.3.0#

Release of hit calling tools.

  • Documentation for pseudotime module

  • Single-cell based hit calling integration

  • KW test & feature selection improvements

0.3.1#

  • Switched all QC methods to unsupervised

  • Expanded unit tests

  • Improved documentation and argument consistency

  • Updated pre-commit configs and versions

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